PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc01072.1.g00220.1.sm.mk
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family ERF
Protein Properties Length: 230aa    MW: 23823.3 Da    PI: 4.0865
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc01072.1.g00220.1.sm.mkgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP251.62.3e-162775355
                           AP2  3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                                  ykGVr ++ +g+Wv+e+r p   g+++r++lg++ tae Aa+a++aa ++l+g
  Zpz_sc01072.1.g00220.1.sm.mk 27 YKGVRMRS-WGSWVSEVRAP---GQKTRIWLGSHSTAEAAARAYDAALLCLKG 75
                                  9****998.*******9998...557************************998 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5103220.6662685IPR001471AP2/ERF domain
SMARTSM003804.7E-282691IPR001471AP2/ERF domain
SuperFamilySSF541712.55E-162686IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.102.2E-262685IPR001471AP2/ERF domain
PRINTSPR003672.9E-82738IPR001471AP2/ERF domain
PfamPF008474.1E-102775IPR001471AP2/ERF domain
CDDcd000183.64E-142786No hitNo description
PRINTSPR003672.9E-84965IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 230 aa     Download sequence    Send to blast
MVKTAASDDT AGAAKTQHGG GGRKGTYKGV RMRSWGSWVS EVRAPGQKTR IWLGSHSTAE  60
AAARAYDAAL LCLKGSAAAA DLNFPVRLPF DLPAAAMSPK EIQRVAAAAA AGNAGGDRAF  120
GACTGTDDVD DGSAVSGDSA SAVSSPESTV TSETEPEPEA ACCHGDVLDY GLLADIDAFF  180
PSPECMEYAM MDPCSTFFAP APMAAMSDDD VFWEDQEGDI ALWSFSTLDC
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0046875e-78AP004687.2 Oryza sativa Japonica Group genomic DNA, chromosome 6, PAC clone:P0021C04.
GenBankAP0149625e-78AP014962.1 Oryza sativa Japonica Group DNA, chromosome 6, cultivar: Nipponbare, complete sequence.
GenBankCP0126145e-78CP012614.1 Oryza sativa Indica Group cultivar RP Bio-226 chromosome 6 sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004964908.12e-79PREDICTED: ethylene-responsive transcription factor ERF014-like
TrEMBLK3Y1B33e-79K3Y1B3_SETIT; Uncharacterized protein
STRINGSi007977m8e-79(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP31973469
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G44830.11e-20ERF family protein